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Publication : A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation.

First Author  Yao Z Year  2021
Journal  Cell Volume  184
Issue  12 Pages  3222-3241.e26
PubMed ID  34004146 Mgi Jnum  J:314776
Mgi Id  MGI:6718734 Doi  10.1016/j.cell.2021.04.021
Citation  Yao Z, et al. (2021) A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation. Cell 184(12):3222-3241.e26
abstractText  The isocortex and hippocampal formation (HPF) in the mammalian brain play critical roles in perception, cognition, emotion, and learning. We profiled approximately 1.3 million cells covering the entire adult mouse isocortex and HPF and derived a transcriptomic cell-type taxonomy revealing a comprehensive repertoire of glutamatergic and GABAergic neuron types. Contrary to the traditional view of HPF as having a simpler cellular organization, we discover a complete set of glutamatergic types in HPF homologous to all major subclasses found in the six-layered isocortex, suggesting that HPF and the isocortex share a common circuit organization. We also identify large-scale continuous and graded variations of cell types along isocortical depth, across the isocortical sheet, and in multiple dimensions in hippocampus and subiculum. Overall, our study establishes a molecular architecture of the mammalian isocortex and hippocampal formation and begins to shed light on its underlying relationship with the development, evolution, connectivity, and function of these two brain structures.
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