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Publication : Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups.

First Author  Lobón-Iglesias MJ Year  2023
Journal  Nat Commun Volume  14
Issue  1 Pages  6669
PubMed ID  37863903 Mgi Jnum  J:341957
Mgi Id  MGI:7544525 Doi  10.1038/s41467-023-42371-7
Citation  Lobon-Iglesias MJ, et al. (2023) Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups. Nat Commun 14(1):6669
abstractText  Atypical teratoid rhabdoid tumors (ATRT) are divided into MYC, TYR and SHH subgroups, suggesting diverse lineages of origin. Here, we investigate the imaging of human ATRT at diagnosis and the precise anatomic origin of brain tumors in the Rosa26-Cre(ERT2)::Smarcb1(flox/flox) model. This cross-species analysis points to an extra-cerebral origin for MYC tumors. Additionally, we clearly distinguish SHH ATRT emerging from the cerebellar anterior lobe (CAL) from those emerging from the basal ganglia (BG) and intra-ventricular (IV) regions. Molecular characteristics point to the midbrain-hindbrain boundary as the origin of CAL SHH ATRT, and to the ganglionic eminence as the origin of BG/IV SHH ATRT. Single-cell RNA sequencing on SHH ATRT supports these hypotheses. Trajectory analyses suggest that SMARCB1 loss induces a de-differentiation process mediated by repressors of the neuronal program such as REST, ID and the NOTCH pathway.
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