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Publication : Genome-wide association study identifies five risk loci for pernicious anemia.

First Author  Laisk T Year  2021
Journal  Nat Commun Volume  12
Issue  1 Pages  3761
PubMed ID  34145262 Mgi Jnum  J:337111
Mgi Id  MGI:6725501 Doi  10.1038/s41467-021-24051-6
Citation  Laisk T, et al. (2021) Genome-wide association study identifies five risk loci for pernicious anemia. Nat Commun 12(1):3761
abstractText  Pernicious anemia is a rare condition characterized by vitamin B12 deficiency anemia due to lack of intrinsic factor, often caused by autoimmune gastritis. Patients with pernicious anemia have a higher incidence of other autoimmune disorders, such as type 1 diabetes, vitiligo, and autoimmune thyroid issues. Therefore, the disease has a clear autoimmune basis, although the genetic susceptibility factors have thus far remained poorly studied. We conduct a genome-wide association study meta-analysis in 2166 cases and 659,516 European controls from population-based biobanks and identify genome-wide significant signals in or near the PTPN22 (rs6679677, p = 1.91 x 10(-24), OR = 1.63), PNPT1 (rs12616502, p = 3.14 x 10(-8), OR = 1.70), HLA-DQB1 (rs28414666, p = 1.40 x 10(-16), OR = 1.38), IL2RA (rs2476491, p = 1.90 x 10(-8), OR = 1.22) and AIRE (rs74203920, p = 2.33 x 10(-9), OR = 1.83) genes, thus providing robust associations between pernicious anemia and genetic risk factors.
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