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Publication : Imaging volumetric dynamics at high speed in mouse and zebrafish brain with confocal light field microscopy.

First Author  Zhang Z Year  2021
Journal  Nat Biotechnol Volume  39
Issue  1 Pages  74-83
PubMed ID  32778840 Mgi Jnum  J:359581
Mgi Id  MGI:7788536 Doi  10.1038/s41587-020-0628-7
Citation  Zhang Z, et al. (2021) Imaging volumetric dynamics at high speed in mouse and zebrafish brain with confocal light field microscopy. Nat Biotechnol 39(1):74-83
abstractText  A detailed understanding of the function of neural networks and how they are supported by a dynamic vascular system requires fast three-dimensional imaging in thick tissues. Here we present confocal light field microscopy, a method that enables fast volumetric imaging in the brain at depths of hundreds of micrometers. It uses a generalized confocal detection scheme that selectively collects fluorescent signals from the in-focus volume and provides optical sectioning capability to improve imaging resolution and sensitivity in thick tissues. We demonstrate recording of whole-brain calcium transients in freely swimming zebrafish larvae and observe behaviorally correlated activities in single neurons during prey capture. Furthermore, in the mouse brain, we detect neural activities at depths of up to 370 mum and track blood cells at 70 Hz over a volume of diameter 800 mum x thickness 150 mum and depth of up to 600 mum.
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