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Publication : Identification of neurodegenerative factors using translatome-regulatory network analysis.

First Author  Brichta L Year  2015
Journal  Nat Neurosci Volume  18
Issue  9 Pages  1325-33
PubMed ID  26214373 Mgi Jnum  J:241067
Mgi Id  MGI:5897671 Doi  10.1038/nn.4070
Citation  Brichta L, et al. (2015) Identification of neurodegenerative factors using translatome-regulatory network analysis. Nat Neurosci 18(9):1325-33
abstractText  For degenerative disorders of the CNS, the main obstacle to therapeutic advancement has been the challenge of identifying the key molecular mechanisms underlying neuronal loss. We developed a combinatorial approach including translational profiling and brain regulatory network analysis to search for key determinants of neuronal survival or death. Following the generation of transgenic mice for cell type-specific profiling of midbrain dopaminergic neurons, we established and compared translatome libraries reflecting the molecular signature of these cells at baseline or under degenerative stress. Analysis of these libraries by interrogating a context-specific brain regulatory network led to the identification of a repertoire of intrinsic upstream regulators that drive the dopaminergic stress response. The altered activity of these regulators was not associated with changes in their expression levels. This strategy can be generalized for the identification of molecular determinants involved in the degeneration of other classes of neurons.
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