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Publication : Ultraconserved Enhancers Are Required for Normal Development.

First Author  Dickel DE Year  2018
Journal  Cell Volume  172
Issue  3 Pages  491-499.e15
PubMed ID  29358049 Mgi Jnum  J:254531
Mgi Id  MGI:6111923 Doi  10.1016/j.cell.2017.12.017
Citation  Dickel DE, et al. (2018) Ultraconserved Enhancers Are Required for Normal Development. Cell 172(3):491-499.e15
abstractText  Non-coding "ultraconserved" regions containing hundreds of consecutive bases of perfect sequence conservation across mammalian genomes can function as distant-acting enhancers. However, initial deletion studies in mice revealed that loss of such extraordinarily constrained sequences had no immediate impact on viability. Here, we show that ultraconserved enhancers are required for normal development. Focusing on some of the longest ultraconserved sites genome wide, located near the essential neuronal transcription factor Arx, we used genome editing to create an expanded series of knockout mice lacking individual or combinations of ultraconserved enhancers. Mice with single or pairwise deletions of ultraconserved enhancers were viable and fertile but in nearly all cases showed neurological or growth abnormalities, including substantial alterations of neuron populations and structural brain defects. Our results demonstrate the functional importance of ultraconserved enhancers and indicate that remarkably strong sequence conservation likely results from fitness deficits that appear subtle in a laboratory setting.
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