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Publication : Sequence-specific methylation of the mouse H19 gene in embryonic cells deficient in the Dnmt-1 gene.

First Author  Warnecke PM Year  1998
Journal  Dev Genet Volume  22
Issue  2 Pages  111-21
PubMed ID  9581283 Mgi Jnum  J:47357
Mgi Id  MGI:1203340 Doi  10.1002/(SICI)1520-6408(1998)22:2<111::AID-DVG1>3.0.CO;2-9
Citation  Warnecke PM, et al. (1998) Sequence-specific methylation of the mouse H19 gene in embryonic cells deficient in the Dnmt-1 gene. Dev Genet 22(2):111-21
abstractText  We have used Dnmtc/c ES cells that are homozygous for disruption of the DNA methyltransferase gene to address how de novo methylation is propagated and whether it is directed to specific sites in the early embryo. We examined the imprinted H19 gene and the specific-sequence region implicated as an imprinting mark to determine whether de novo methylation was occurring at a restricted set of sites. Since the imprinting mark was found to be methylated differentially at all stages of development, we reasoned that the sequence may still be a target for the de novo methylation activity found in the Dnmtc/c cells, even though the loss of maintenance the methylase activity renders the H19 promoter active. We used bisulfite genomic sequencing to determine the methylation state of the imprinted region of the H19 gene and found a low level of DNA methylation at specific single CpG sites in the upstream region of the imprinted H19 sequence in the Dnmtc/c mutant ES cells. Moreover, these CpG sites appeared to be favoured targets for further de novo methylation of neighbouring CpG sites in rescued ES cells, which possess apparently normal maintenance activity. Our data provide further evidence for a separate methylating activity in ES cells and indicate that this activity displays sequence specificity.
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