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Publication : Multiple Arkadia/RNF111 structures coordinate its Polycomb body association and transcriptional control.

First Author  Sun H Year  2014
Journal  Mol Cell Biol Volume  34
Issue  16 Pages  2981-95
PubMed ID  24912682 Mgi Jnum  J:224272
Mgi Id  MGI:5661802 Doi  10.1128/MCB.00036-14
Citation  Sun H, et al. (2014) Multiple Arkadia/RNF111 structures coordinate its Polycomb body association and transcriptional control. Mol Cell Biol 34(16):2981-95
abstractText  The RING domain protein Arkadia/RNF111 is a ubiquitin ligase in the transforming growth factor beta (TGFbeta) pathway. We previously identified Arkadia as a small ubiquitin-like modifier (SUMO)-binding protein with clustered SUMO-interacting motifs (SIMs) that together form a SUMO-binding domain (SBD). However, precisely how SUMO interaction contributes to the function of Arkadia was not resolved. Through analytical molecular and cell biology, we found that the SIMs share redundant function with Arkadia's M domain, a region distinguishing Arkadia from its paralogs ARKL1/ARKL2 and the prototypical SUMO-targeted ubiquitin ligase (STUbL) RNF4. The SIMs and M domain together promote both Arkadia's colocalization with CBX4/Pc2, a component of Polycomb bodies, and the activation of a TGFbeta pathway transcription reporter. Transcriptome profiling through RNA sequencing showed that Arkadia can both promote and inhibit gene expression, indicating that Arkadia's activity in transcriptional control may depend on the epigenetic context, defined by Polycomb repressive complexes and DNA methylation.
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