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Publication : Autophagy supports genomic stability by degrading retrotransposon RNA.

First Author  Guo H Year  2014
Journal  Nat Commun Volume  5
Pages  5276 PubMed ID  25366815
Mgi Jnum  J:225332 Mgi Id  MGI:5692396
Doi  10.1038/ncomms6276 Citation  Guo H, et al. (2014) Autophagy supports genomic stability by degrading retrotransposon RNA. Nat Commun 5:5276
abstractText  Many cytoplasmic substrates degraded by autophagy have been identified; however, the impact of RNA degradation by autophagy remains uncertain. Retrotransposons comprise 40% of the human genome and are a major source of genetic variation among species, individuals and cells. Retrotransposons replicate via a copy-paste mechanism involving a cytoplasmic RNA intermediate. Here we report that autophagy degrades retrotransposon RNA from both long and short interspersed elements, preventing new retrotransposon insertions into the genome. Retrotransposon RNA localizes to RNA granules, whose selective degradation is facilitated by the autophagy receptors NDP52 and p62. Accordingly, NDP52 and p62 control retrotransposon insertion in the genome. Mice lacking a copy of Atg6/Beclin1, a gene critical for autophagy, also accumulate both retrotransposon RNA and genomic insertions. Thus, autophagy physiologically buffers genetic variegation by degrading retrotransposon RNA. This may contribute to the increased tumorigenesis occuring when autophagy is inhibited and suggest a role for autophagy in tempering evolutionary change.
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