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Publication : Regulation of the imprinted Dlk1-Dio3 locus by allele-specific enhancer activity.

First Author  Luo Z Year  2016
Journal  Genes Dev Volume  30
Issue  1 Pages  92-101
PubMed ID  26728555 Mgi Jnum  J:227686
Mgi Id  MGI:5702493 Doi  10.1101/gad.270413.115
Citation  Luo Z, et al. (2016) Regulation of the imprinted Dlk1-Dio3 locus by allele-specific enhancer activity. Genes Dev 30(1):92-101
abstractText  Genomic imprinting is a critical developmental process characteristic of parent of origin-specific gene expression. It is well accepted that differentially DNA-methylated regions (DMRs) and enhancers are two major classes of cis-elements determining parent of origin-specific gene expression, with each recruiting different sets of transcription factors. Previously, we identified the AF4/FMR2 (AFF) family protein AFF3 within the transcription elongation complex SEC-L3. Here, we report that AFF3 can specifically bind both gametic DMRs (gDMRs) and enhancers within imprinted loci in an allele-specific manner. We identify the molecular regulators involved in the recruitment of AFF3 to gDMRs and provide mechanistic insight into the requirement of AFF3 at an enhancer for the expression of an approximately 200-kb polycistronic transcript within the imprinted Dlk1-Dio3 locus. Our data suggest that the heterochromatic environment at the gDMR reinforces silencing of its related enhancer by controlling the binding and activity of AFF3 in an allele-specific manner. In summary, this study provides molecular details about the regulation of dosage-critical imprinted gene expression through the regulated binding of the transcription elongation factor AFF3 between a DMR and an enhancer.
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