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Publication : Molecular recognition of <i>S</i>-nitrosothiol substrate by its cognate protein denitrosylase.

First Author  Stomberski CT Year  2019
Journal  J Biol Chem Volume  294
Issue  5 Pages  1568-1578
PubMed ID  30538128 Mgi Jnum  J:274754
Mgi Id  MGI:6294580 Doi  10.1074/jbc.RA118.004947
Citation  Stomberski CT, et al. (2019) Molecular recognition of S-nitrosothiol substrate by its cognate protein denitrosylase. J Biol Chem 294(5):1568-1578
abstractText  Protein S-nitrosylation mediates a large part of nitric oxide's influence on cellular function by providing a fundamental mechanism to control protein function across different species and cell types. At steady state, cellular S-nitrosylation reflects dynamic equilibria between S-nitrosothiols (SNOs) in proteins and small molecules (low-molecular-weight SNOs) whose levels are regulated by dedicated S-nitrosylases and denitrosylases. S-Nitroso-CoA (SNO-CoA) and its cognate denitrosylases, SNO-CoA reductases (SCoRs), are newly identified determinants of protein S-nitrosylation in both yeast and mammals. Because SNO-CoA is a minority species among potentially thousands of cellular SNOs, SCoRs must preferentially recognize this SNO substrate. However, little is known about the molecular mechanism by which cellular SNOs are recognized by their cognate enzymes. Using mammalian cells, molecular modeling, substrate-capture assays, and mutagenic analyses, we identified a single conserved surface Lys (Lys-127) residue as well as active-site interactions of the SNO group that mediate recognition of SNO-CoA by SCoR. Comparing SCoR(K127A) versus SCoR(WT) HEK293 cells, we identified a SNO-CoA-dependent nitrosoproteome, including numerous metabolic protein substrates. Finally, we discovered that the SNO-CoA/SCoR system has a role in mitochondrial metabolism. Collectively, our findings provide molecular insights into the basis of specificity in SNO-CoA-mediated metabolic signaling and suggest a role for SCoR-regulated S-nitrosylation in multiple metabolic processes.
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