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Publication : WAPL maintains a cohesin loading cycle to preserve cell-type-specific distal gene regulation.

First Author  Liu NQ Year  2021
Journal  Nat Genet Volume  53
Issue  1 Pages  100-109
PubMed ID  33318687 Mgi Jnum  J:327243
Mgi Id  MGI:6742198 Doi  10.1038/s41588-020-00744-4
Citation  Liu NQ, et al. (2021) WAPL maintains a cohesin loading cycle to preserve cell-type-specific distal gene regulation. Nat Genet 53(1):100-109
abstractText  The cohesin complex has an essential role in maintaining genome organization. However, its role in gene regulation remains largely unresolved. Here we report that the cohesin release factor WAPL creates a pool of free cohesin, in a process known as cohesin turnover, which reloads it to cell-type-specific binding sites. Paradoxically, stabilization of cohesin binding, following WAPL ablation, results in depletion of cohesin from these cell-type-specific regions, loss of gene expression and differentiation. Chromosome conformation capture experiments show that cohesin turnover is important for maintaining promoter-enhancer loops. Binding of cohesin to cell-type-specific sites is dependent on the pioneer transcription factors OCT4 (POU5F1) and SOX2, but not NANOG. We show the importance of cohesin turnover in controlling transcription and propose that a cycle of cohesin loading and off-loading, instead of static cohesin binding, mediates promoter and enhancer interactions critical for gene regulation.
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