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Publication : Systematic identification of cell-fate regulatory programs using a single-cell atlas of mouse development.

First Author  Fei L Year  2022
Journal  Nat Genet Volume  54
Issue  7 Pages  1051-1061
PubMed ID  35817981 Mgi Jnum  J:328715
Mgi Id  MGI:7312213 Doi  10.1038/s41588-022-01118-8
Citation  Fei L, et al. (2022) Systematic identification of cell-fate regulatory programs using a single-cell atlas of mouse development. Nat Genet 54(7):1051-1061
abstractText  Waddington's epigenetic landscape is a metaphor frequently used to illustrate cell differentiation. Recent advances in single-cell genomics are altering our understanding of the Waddington landscape, yet the molecular mechanisms of cell-fate decisions remain poorly understood. We constructed a cell landscape of mouse lineage differentiation during development at the single-cell level and described both lineage-common and lineage-specific regulatory programs during cell-type maturation. We also found lineage-common regulatory programs that are broadly active during the development of invertebrates and vertebrates. In particular, we identified Xbp1 as an evolutionarily conserved regulator of cell-fate determinations across different species. We demonstrated that Xbp1 transcriptional regulation is important for the stabilization of the gene-regulatory networks for a wide range of mouse cell types. Our results offer genetic and molecular insights into cellular gene-regulatory programs and will serve as a basis for further advancing the understanding of cell-fate decisions.
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