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Publication : Converging roles of PSENEN/PEN2 and CLN3 in the autophagy-lysosome system.

First Author  Klein M Year  2022
Journal  Autophagy Volume  18
Issue  9 Pages  2068-2085
PubMed ID  34964690 Mgi Jnum  J:327484
Mgi Id  MGI:7332710 Doi  10.1080/15548627.2021.2016232
Citation  Klein M, et al. (2022) Converging roles of PSENEN/PEN2 and CLN3 in the autophagy-lysosome system. Autophagy 18(9):2068-2085
abstractText  PSENEN/PEN2 is the smallest subunit of the gamma-secretase complex, an intramembrane protease that cleaves proteins within their transmembrane domains. Mutations in components of the gamma-secretase underlie familial Alzheimer disease. In addition to its proteolytic activity, supplementary, gamma-secretase independent, functions in the macroautophagy/autophagy-lysosome system have been proposed. Here, we screened for PSENEN-interacting proteins and identified CLN3. Mutations in CLN3 are causative for juvenile neuronal ceroid lipofuscinosis, a rare lysosomal storage disorder considered the most common neurodegenerative disease in children. As mutations in the PSENEN and CLN3 genes cause different neurodegenerative diseases, understanding shared cellular functions of both proteins might be pertinent for understanding general cellular mechanisms underlying neurodegeneration. We hypothesized that CLN3 modulates gamma-secretase activity and that PSENEN and CLN3 play associated roles in the autophagy-lysosome system. We applied CRISPR gene-editing and obtained independent isogenic HeLa knockout cell lines for PSENEN and CLN3. Following previous studies, we demonstrate that PSENEN is essential for forming a functional gamma-secretase complex and is indispensable for gamma-secretase activity. In contrast, CLN3 does not modulate gamma-secretase activity to a significant degree. We observed in PSENEN- and CLN3-knockout cells corresponding alterations in the autophagy-lysosome system. These include reduced activity of lysosomal enzymes and lysosome number, an increased number of autophagosomes, increased lysosome-autophagosome fusion, and elevated levels of TFEB (transcription factor EB). Our study strongly suggests converging roles of PSENEN and CLN3 in the autophagy-lysosome system in a gamma-secretase activity-independent manner, supporting the idea of common cytopathological processes underlying different neurodegenerative diseases.Abbreviations: Abeta, amyloid-beta; AD, Alzheimer disease; APP, amyloid precursor protein; ATP5MC, ATP synthase membrane subunit c; DQ-BSA, dye-quenched bovine serum albumin; ER, endoplasmic reticulum; GFP, green fluorescent protein; ICC, immunocytochemistry; ICD, intracellular domain; JNCL, juvenile neuronal ceroid lipofuscinosis; KO, knockout; LC3, microtubule associated protein 1 light chain 3; NCL, neuronal ceroid lipofuscinoses; PSEN, presenilin; PSENEN/PEN2: presenilin enhancer, gamma-secretase subunit; TAP, tandem affinity purification; TEV, tobacco etch virus; TF, transferrin; WB, Western blot; WT, wild type.
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