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Publication : Obtaining and Loading TreeFam Gene Family Annotations

First Author  Mouse Genome Informatics Scientific Curators Year  2006
Mgi Jnum  J:114441 Mgi Id  MGI:3689109
Citation  Mouse Genome Informatics Scientific Curators (2006) Obtaining and Loading TreeFam Gene Family Annotations.
abstractText  We represent genes in MGI as sequence objects that contain the genomic sequence between the start and end coordinates (without intron/exon boundaries). Annotated genome features for C57BL/6J are downloaded from sources including Ensembl. We download a file from TreeFam containing Ensembl IDs for genes represented in TreeFam's phylogenetic trees of gene families in animals. We then make automated and curated associations between MGI's gene records and TreeFam's phylogenetic trees.
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