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Publication : Segregated basal ganglia output pathways correspond to genetically divergent neuronal subclasses.

First Author  Mendelsohn AI Year  2025
Journal  Cell Rep Volume  44
Issue  4 Pages  115454
PubMed ID  40146776 Mgi Jnum  J:366534
Mgi Id  MGI:8191136 Doi  10.1016/j.celrep.2025.115454
Citation  Mendelsohn AI, et al. (2025) Segregated basal ganglia output pathways correspond to genetically divergent neuronal subclasses. Cell Rep 44(4):115454
abstractText  The basal ganglia control multiple sensorimotor behaviors through anatomically segregated and topographically organized subcircuits with outputs to specific downstream circuits. However, it is unclear how the anatomical organization of basal ganglia output circuits relates to the molecular diversity of cell types. Here, we demonstrate that the major output nucleus of the basal ganglia, the substantia nigra pars reticulata (SNr), is comprised of transcriptomically distinct subclasses that reflect its distinct progenitor lineages. We show that these subclasses are topographically organized within the SNr, project to distinct targets in the midbrain and hindbrain, and receive inputs from different striatal subregions. Finally, we show that these mouse subclasses are also identifiable in human SNr neurons, suggesting that the genetic organization of the SNr is evolutionarily conserved. These findings provide a unifying logic for how the developmental specification of diverse SNr neurons relates to the anatomical organization of basal ganglia circuits controlling specialized downstream brain regions.
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